Gk-arrays
Efficient read indexing
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gkarrays
pairedEndReadIterator
gkarrays::pairedEndReadIterator Member List
This is the complete list of members for
gkarrays::pairedEndReadIterator
, including all inherited members.
getLength
()
gkarrays::pairedEndReadIterator
[virtual]
getName
()
gkarrays::pairedEndReadIterator
[virtual]
getPair
()
gkarrays::pairedEndReadIterator
getQuality
()
gkarrays::pairedEndReadIterator
[virtual]
getReadNumber
()
gkarrays::pairedEndReadIterator
[virtual]
getSequence
()
gkarrays::pairedEndReadIterator
[virtual]
isFinished
()
gkarrays::pairedEndReadIterator
[virtual]
isTheFirstMemberOfPair
()
gkarrays::pairedEndReadIterator
operator*
()
gkarrays::pairedEndReadIterator
[virtual]
operator++
()
gkarrays::pairedEndReadIterator
[virtual]
operator++
(int)
gkarrays::pairedEndReadIterator
[virtual]
pairedEndReadIterator
(char *filename1, char *filename2, uint k=0, uint length=0, bool printWarnings=false)
gkarrays::pairedEndReadIterator
pairedEndReadIterator
(const pairedEndReadIterator &mit)
gkarrays::pairedEndReadIterator
printWarnings
()
gkarrays::readIterator
setPrintWarnings
(bool isVisible)
gkarrays::readIterator
~pairedEndReadIterator
()
gkarrays::pairedEndReadIterator
[virtual]
~readIterator
()
gkarrays::readIterator
[inline, virtual]
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