Gk-arrays
Efficient read indexing
gkarrays::singleReadIterator Member List
This is the complete list of members for gkarrays::singleReadIterator, including all inherited members.
getLength()gkarrays::singleReadIterator [virtual]
getName()gkarrays::singleReadIterator [virtual]
getQuality()gkarrays::singleReadIterator [virtual]
getReadNumber()gkarrays::singleReadIterator [virtual]
getSequence()gkarrays::singleReadIterator [virtual]
isDiscarded()gkarrays::singleReadIterator
isFinished()gkarrays::singleReadIterator [virtual]
operator*()gkarrays::singleReadIterator [virtual]
operator++()gkarrays::singleReadIterator [virtual]
operator++(int)gkarrays::singleReadIterator [virtual]
printWarnings()gkarrays::readIterator
setAutoDiscard(bool value)gkarrays::singleReadIterator
setPrintWarnings(bool isVisible)gkarrays::readIterator
singleReadIterator(char *filename, uint k=0, uint length=0, bool printWarnings=false, bool autoDiscard=true, bool autoFirstIteration=true)gkarrays::singleReadIterator
singleReadIterator(kseq_t *seq, uint k=0, uint length=0)gkarrays::singleReadIterator
singleReadIterator(const singleReadIterator &mit)gkarrays::singleReadIterator
~readIterator()gkarrays::readIterator [inline, virtual]
~singleReadIterator()gkarrays::singleReadIterator
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